squaredindex

@riaanknoetze Will do, thank you.

I’m a bit of a wp-noob, I’m not enterly sure where that is located in roots structure sorry.

From what I can tells roots is a little different and puts that stuff under different lib folders.

here are a few of the files that might be relevant:

scripts.php

<?php
/**
 * Enqueue scripts and stylesheets
 *
 * Enqueue stylesheets in the following order:
 * 1. /theme/assets/css/bootstrap.css
 * 2. /theme/assets/css/app.css
 *
 * Enqueue scripts in the following order:
 * 1. jquery-1.10.2.min.js via Google CDN
 * 2. /theme/assets/js/vendor/modernizr-2.6.2.min.js
 * 3. /theme/assets/js/plugins.js (in footer)
 * 4. /theme/assets/js/main.js    (in footer)
 */
function roots_scripts() {
  wp_enqueue_style('roots_bootstrap', get_template_directory_uri() . '/assets/css/bootstrap.css', false, null);
  wp_enqueue_style('roots_app', get_template_directory_uri() . '/assets/css/app.css', false, null);

  // jQuery is loaded using the same method from HTML5 Boilerplate:
  // Grab Google CDN's latest jQuery with a protocol relative URL; fallback to local if offline
  // It's kept in the header instead of footer to avoid conflicts with plugins.
  if (!is_admin() && current_theme_supports('jquery-cdn')) {
    wp_deregister_script('jquery');
    wp_register_script('jquery', '//ajax.googleapis.com/ajax/libs/jquery/1.10.2/jquery.min.js', false, null, false);
    add_filter('script_loader_src', 'roots_jquery_local_fallback', 10, 2);
  }

  if (is_single() && comments_open() && get_option('thread_comments')) {
    wp_enqueue_script('comment-reply');
  }

  wp_register_script('modernizr', get_template_directory_uri() . '/assets/js/vendor/modernizr-2.6.2.min.js', false, null, false);
  wp_register_script('roots_plugins', get_template_directory_uri() . '/assets/js/plugins.js', false, null, true);
  wp_register_script('roots_main', get_template_directory_uri() . '/assets/js/main.js', false, null, true);
  wp_enqueue_script('jquery');
  wp_enqueue_script('modernizr');
  wp_enqueue_script('roots_plugins');
  wp_enqueue_script('roots_main');
}
add_action('wp_enqueue_scripts', 'roots_scripts', 100);

// http://wordpress.stackexchange.com/a/12450
function roots_jquery_local_fallback($src, $handle) {
  static $add_jquery_fallback = false;

  if ($add_jquery_fallback) {
    echo '<script>window.jQuery || document.write(\'<script src="' . get_template_directory_uri() . '/assets/js/vendor/jquery-1.10.2.min.js"><\/script>\')</script>' . "\n";
    $add_jquery_fallback = false;
  }

  if ($handle === 'jquery') {
    $add_jquery_fallback = true;
  }

  return $src;
}

function roots_google_analytics() { ?>
<script>
  (function(b,o,i,l,e,r){b.GoogleAnalyticsObject=l;b[l]||(b[l]=
  function(){(b[l].q=b[l].q||[]).push(arguments)});b[l].l=+new Date;
  e=o.createElement(i);r=o.getElementsByTagName(i)[0];
  e.src='//www.google-analytics.com/analytics.js';
  r.parentNode.insertBefore(e,r)}(window,document,'script','ga'));
  ga('create','<?php echo GOOGLE_ANALYTICS_ID; ?>');ga('send','pageview');
</script>

<?php }
if (GOOGLE_ANALYTICS_ID) {
  add_action('wp_footer', 'roots_google_analytics', 20);
}

relative-urls.php

re<?php
/**
 * Root relative URLs
 *
 * WordPress likes to use absolute URLs on everything - let's clean that up.
 * Inspired by http://www.456bereastreet.com/archive/201010/how_to_make_wordpress_urls_root_relative/
 *
 * You can enable/disable this feature in config.php:
 * current_theme_supports('root-relative-urls');
 *
 * @author Scott Walkinshaw <scott.walkinshaw@gmail.com>
 */
function roots_root_relative_url($input) {
  preg_match('|https?://([^/]+)(/.*)|i', $input, $matches);

  if (isset($matches[1]) && isset($matches[2]) && $matches[1] === $_SERVER['SERVER_NAME']) {
    return wp_make_link_relative($input);
  } else {
    return $input;
  }
}

function roots_enable_root_relative_urls() {
  return !(is_admin() || in_array($GLOBALS['pagenow'], array('wp-login.php', 'wp-register.php'))) && current_theme_supports('root-relative-urls');
}

if (roots_enable_root_relative_urls()) {
  $root_rel_filters = array(
    'bloginfo_url',
    'the_permalink',
    'wp_list_pages',
    'wp_list_categories',
    'roots_wp_nav_menu_item',
    'the_content_more_link',
    'the_tags',
    'get_pagenum_link',
    'get_comment_link',
    'month_link',
    'day_link',
    'year_link',
    'tag_link',
    'the_author_posts_link',
    'script_loader_src',
    'style_loader_src'
  );

  add_filters($root_rel_filters, 'roots_root_relative_url');
}

rewrites.php

<?php
/**
 * URL rewriting
 *
 * Rewrites do not happen for multisite installations or child themes
 *
 * Rewrite:
 *   /wp-content/themes/themename/assets/css/ to /assets/css/
 *   /wp-content/themes/themename/assets/js/  to /assets/js/
 *   /wp-content/themes/themename/assets/img/ to /assets/img/
 *   /wp-content/plugins/                     to /plugins/
 *
 * If you aren't using Apache, alternate configuration settings can be found in the docs.
 *
 * @link https://github.com/retlehs/roots/blob/master/doc/rewrites.md
 */
function roots_add_rewrites($content) {
  global $wp_rewrite;
  $roots_new_non_wp_rules = array(
    'assets/css/(.*)'      => THEME_PATH . '/assets/css/$1',
    'assets/js/(.*)'       => THEME_PATH . '/assets/js/$1',
    'assets/img/(.*)'      => THEME_PATH . '/assets/img/$1',
    'plugins/(.*)'         => RELATIVE_PLUGIN_PATH . '/$1'
  );
  $wp_rewrite->non_wp_rules = array_merge($wp_rewrite->non_wp_rules, $roots_new_non_wp_rules);
  return $content;
}

function roots_clean_urls($content) {
  if (strpos($content, RELATIVE_PLUGIN_PATH) > 0) {
    return str_replace('/' . RELATIVE_PLUGIN_PATH,  '/plugins', $content);
  } else {
    return str_replace('/' . THEME_PATH, '', $content);
  }
}

if (!is_multisite() && !is_child_theme()) {
  if (current_theme_supports('rewrites')) {
    add_action('generate_rewrite_rules', 'roots_add_rewrites');
  }

  if (!is_admin() && current_theme_supports('rewrites')) {
    $tags = array(
      'plugins_url',
      'bloginfo',
      'stylesheet_directory_uri',
      'template_directory_uri',
      'script_loader_src',
      'style_loader_src'
    );

    add_filters($tags, 'roots_clean_urls');
  }
}

and config.php

<?php
/**
 * Enable theme features
 */
add_theme_support('root-relative-urls');    // Enable relative URLs
add_theme_support('rewrites');              // Enable URL rewrites
add_theme_support('bootstrap-top-navbar');  // Enable Bootstrap's top navbar
add_theme_support('bootstrap-gallery');     // Enable Bootstrap's thumbnails component on [gallery]
add_theme_support('nice-search');           // Enable /?s= to /search/ redirect
add_theme_support('jquery-cdn');            // Enable to load jQuery from the Google CDN

/**
 * Configuration values
 */
define('GOOGLE_ANALYTICS_ID', ''); // UA-XXXXX-Y
define('POST_EXCERPT_LENGTH', 40);

/**
 * .main classes
 */
function roots_main_class() {
  if (roots_display_sidebar()) {
    // Classes on pages with the sidebar
    $class = 'col-sm-8 col-lg-8';
  } else {
    // Classes on full width pages
    $class = 'col-lg-12';
  }

  return $class;
}

/**
 * .sidebar classes
 */
function roots_sidebar_class() {
  return 'col-sm-4 col-lg-4';
}

/**
 * Define which pages shouldn't have the sidebar
 *
 * See lib/sidebar.php for more details
 */
function roots_display_sidebar() {
  $sidebar_config = new Roots_Sidebar(
    /**
     * Conditional tag checks (http://codex.wordpress.org/Conditional_Tags)
     * Any of these conditional tags that return true won't show the sidebar
     *
     * To use a function that accepts arguments, use the following format:
     *
     * array('function_name', array('arg1', 'arg2'))
     *
     * The second element must be an array even if there's only 1 argument.
     */
    array(
      'is_404',
      //'is_front_page'
    ),
    /**
     * Page template checks (via is_page_template())
     * Any of these page templates that return true won't show the sidebar
     */
    array(
      'template-custom.php'
    )
  );

  return apply_filters('roots_display_sidebar', $sidebar_config->display);
}

/**
 * $content_width is a global variable used by WordPress for max image upload sizes
 * and media embeds (in pixels).
 *
 * Example: If the content area is 640px wide, set $content_width = 620; so images and videos will not overflow.
 * Default: 940px is the default Bootstrap container width.
 */
if (!isset($content_width)) { $content_width = 940; }

/**
 * Define helper constants
 */
$get_theme_name = explode('/themes/', get_template_directory());

define('RELATIVE_PLUGIN_PATH',  str_replace(home_url() . '/', '', plugins_url()));
define('RELATIVE_CONTENT_PATH', str_replace(home_url() . '/', '', content_url()));
define('THEME_NAME',            next($get_theme_name));
define('THEME_PATH',            RELATIVE_CONTENT_PATH . '/themes/' . THEME_NAME);

Sorry about all the code, really not familiar with roots structure yet.