Hello and thank you for your suggestion.
I’ve tried to resync this way now but it still does not sync.
If you’re able to access our account you can compare these two URL:s which shows the template and the site in question which is not in sync with the template:
https://www.wordfence.com/central/template/8dd1c9f3-70d5-4878-b0f9-d383a9193a16
https://www.wordfence.com/central/configuration/91986868-614c-4c9c-9ee6-c773509915ad
Check under the View Customization section, the first checkbox is not in sync with the template.