Install plugin for just one template

I have built a site where many of the pages look quite different but all feature jquery quite heavily, the site runs from 9 different templates within the theme to allow for different sections to look unique. Each template calls the wp_head function.

One of the templates requires a plugin, I have downloaded, installed and activated. This template is very basic and the only functionality on here will be provided by this plugin.

My problem is that the plugin is also jquery based and it breaks the scripts in my other templates. Obviously it works great on the template I need it on but as when I activate the plugin it is placed into the wp_head so is called by all templates.

Is it possible to have only the plugin work on only one template and not show for the rest? I need to include wp_head in all templates incase they want to add another plugin in the future.

Thanks