D3GB

Description

D3GB produce interactive genome maps and genome browsers with
d3 (d3js.org) from fasta, bed, gff, genbank and vcf files.

To cite D3GB in publications, please use:

Barrios, D. & Prieto, C. D3GB: An Interactive Genome Browser for R,
Python, and WordPress. J. Comput. Biol. (2017).
doi:10.1089/cmb.2016.0213

Installation

  1. Upload the plugin files to the /wp-content/plugins/D3GB directory, or install the plugin through the WordPress plugins screen directly.
  2. Activate the plugin through the ‘Plugins’ screen in WordPress
  3. Use the Settings->Genome Browser screen to create D3 Genome Browsers.

FAQ

Installation Instructions
  1. Upload the plugin files to the /wp-content/plugins/D3GB directory, or install the plugin through the WordPress plugins screen directly.
  2. Activate the plugin through the ‘Plugins’ screen in WordPress
  3. Use the Settings->Genome Browser screen to create D3 Genome Browsers.

Contributors & Developers

“D3GB” is open source software. The following people have contributed to this plugin.

Contributors

Translate “D3GB” into your language.

Interested in development?

Browse the code, check out the SVN repository, or subscribe to the development log by RSS.

Changelog

1.2

  • Fixed unsafe SQL calls.
  • Sanitized and validated POST calls.
  • Checking permissions for some actions.
  • All functions correctly prefixed.
  • Extended readme file.