Don't know when this started, but just noticed in webmaster tools that the FAQ sitemap is returning 404 errors for all posts.
If you don't use custom permalinks; all is well.
If you try to use /%postname%/ with Plugin Organizer enabled, you get a 404 for the FAQ post.
The slug for single FAQs is set correctly in both plugins.
WordPress FAQ Manager was working OK with Plugin Organizer V 2.6.
Anyone else got this?