I run wordpress in a directory other than the root. I have it configured with the urls in options just like the codex says to. Everything works beautifully except for links that are created when I drag and drop uploaded files and/or pictures into a post. The link that is created is as if wordpress were installed in the root directory.
I am running wordpress 2.0.4 on powweb.
In general options, under wordpress address I have:
Under Blog address I have:
Links to uploaded files do not include the "/wordpress" directory in them. (e.g. http://emclub.bigbri.net/wp-content/uploads/2006/09/minutes20060825.doc)