Hi the way I solved this was using the Template Hierarchy here... scroll down to see the image.
If you create a taxonomy.php page in your theme folder then all results from the plugin will be displayed using the code from that page. For example, ssjaimia, if you make a copy of archive.php and name it taxonomy.php then the results from this plugin should display the same as your archive results (but exactly the same ... you may want to modify some parts of the file).
You can also further target the results by creating files called 'taxonomy-<your_taxonomy_name>.php' for a specific taxonomy page or 'taxonomy-<your_taxonomy_term>.php' for a page that is specific for a term from one of your taxonomies.
If you can understand the Template Hierarchy then you can do some pretty nice things.