I've been happily running a multisite installation since just before 3.0, and it's working nicely except that my root site ignores pretty permalinks. My subdomains all have it working nicely.
Until now it was just a minor annoyance, but I would really like to use permalinks on my main site as well.
Does anyone know how I should troubleshoot this?
p.s. toddneufeld.com is the root site, and permalinks are NOT currently enabled because they don't work