Hey. I'm sorry if this has been answered before, but I couldn't find it anywhere.
Basically, if you look http://imaginaryroots.org/content/blog/?p=54#comments here for example, you will see it advertises there are 2 comments on the post, which there are, as I have moderated them. However, just below that, it says there aren't any. I haven't touched the code that displays the comments, however, when I upload the original theme (I have modified mine, as you can no doubt see), it seems to work fine.