You can move the meta boxes, but it requires you to edit a row in the database. Find the meta box you want to move in the
wp_scfui_boxes table, and change the
context column value to
side. That should do it :)
I had originally added an interface to change the position and priority of the meta boxes when I built the plugin, but beta testers felt it was too complicated to understand what 'context' and 'priority' were, if they hadn't read the WP codex documentation. You can see the docs here for more info.
Let me know if you need anymore help or have anymore questions.