Link to other parts of site without get_header() error

So I have my wordpress blog all set up
http://typhoon-generation.net/test

but my problem now is linking from the home blog page to the other .php parts of my website. I’d like it to link to “me.php” and “you.php” and so on, and I learned that you can’t call the files directly without getting the get_header() error. So I’m not sure how to go about this. I tried making me.php in my theme folder and linking to it but it didn’t work.

This probably came out really confusing, sorry :/