I had primary domain (example1.com) in Usercode/public_html. I had WordPress multisite under parked domain (example2.com) in Usercode/public_html. I had child sites under example2.com/mobile, example2.com/cp, and example3.com (parked domain of example1.com)
Then I did many changes:
Created subdomain main.example2.com and moved the WP multisite to the main subdomain in Usercode/public_html/main and created new database. At this point every thing in multisite worked fine.
I added domain example4.com and make it the primary domain. This is on folder Usercode/domains/example4.com/public_html.
I moved example2.com as addon domain, that make the domain to have its own folder Usercode/domains/example2.com/public_html.
I moved example3.com as addon domain, that make the domain to have its own folder Usercode/domains/example3.com/public_html.
Moved the data from Usercode/public_html/main to Usercode/domains/example2.com/public_html/main.
At this point I verified my WP multisite and the example2.com, example2.com/mobile, example2.com/cp work fine from wp-admin and site-pages, but example3.com did not work.
Another detail is that example2.com and example3.com as addon has ssl certificate. Attempting to fix WP problem I moved example3.com as parked to domain example2.com but still has WP problem and plus lost the ssl certificate.
I hope there is a way to edit some file to fix the path reference to the example3.com site.
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