Hi, I just did a fresh install of WP 3.9 and iThemes security 4.1.3.
After running through all of the usual settings, the last one that I came to was changing the database prefix. After clicking that, the front and back of the site crashed, it was attempting to run the install again.
Inspecting wp-config.php and phpMyAdmin revealed that while the database tables had been updated, the config file hadn’t, so it was a quick fix for anybody in this situation.
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