I found a great script (xfade2.js) for putting in crossfading header images into my blog. However, I am a recent convert to WordPress from blogger and am finding that any attempt to put this into action completely messes up my theme ("Disciple" theme).
You can see an example of the crossfade (poorly executed) at my blogger blog: 21st Century Catholic.
I have no idea how to implement this in WordPress. Has anyone done this before and can you point me in the right direction to this myself?