Your paths for the new font are probably wrong. Unless the
.woff and other font files are directly in the
fontmeister directory, the code you have in fontmeister.css will need some modifications (the directory name within
fontmeister has to be specified).
BTW, I still don't see any use of a Calligraffiti Regular in any CSS file on your site.
Also I didn't follow what you meant by "uploading it manual but it did not register with your program". The only downloaded fonts that will show up in the font stack are fonts from Font Squirrel, not any others. Manually uploaded fonts are not in the scope of the current release.